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1. DMS-Fold DMS-Fold Public

   Python 15 1

2. SIDFold SIDFold Public

   Python 1

3. HRF_GBM_Rescore HRF_GBM_Rescore Public

   Main repository for HRF_GBM, a rescoring method in Rosetta that uses predicted residue neighbor counts derived from experimental HRPF data to improve protein structure prediction.

   Python

4. IM-complex IM-complex Public

   GROMACS parameter files for short MD simulations to relax and compact docked protein structures prior to Collidoscope TJM CCS calculations. Includes BFS algorithm to identify and remove structurall…

   Python 1

5. TnC_design TnC_design Public

   Data and scripts required to recreate the work in the article "Deep Learning Design-based Metrics Can Elucidate Differences in Troponin C Isoform and Mutant Hydrophobic Patch Exposure "

   Python

6. DMS-Fold2 DMS-Fold2 Public

   Python